genome search | EU-SAGE

Genome-editing techniques are promising tools in plant breeding. To facilitate a more comprehensive understanding of the use of genome editing, EU-SAGE developed an interactive, publicly accessible online database of genome-edited crop plants as described in peer-reviewed scientific publications.
The aim of the database is to inform interested stakeholder communities in a transparent manner about the latest evidence about the use of genome editing in crop plants. Different elements including the plant species, traits, techniques, and applications can be filtered in this database.
Regarding the methodology, a literature search in the bibliographic databases and web pages of governmental agencies was conducted using predefined queries in English. Identifying research articles in other languages was not possible due to language barriers. Patents were not screened.
Peer-reviewed articles were screened for relevance and were included in the database based on pre-defined criteria. The main criterium is that the research article should describe a research study of any crop plant in which a trait has been introduced that is relevant from an agricultural and/or food/feed perspective. The database does neither give information on the stage of development of the crop plant, nor on the existence of the intention to develop the described crop plants to be marketed.
This database will be regularly updated. Please contact us via the following webpage in case you would like to inform us about a new scientific study of crops developed for market-oriented agricultural production as a result of genome editing

Displaying 35 results

Traits related to biotic stress tolerance

Viral resistance: resistance to pepper mottle virus (PepMoV), causing considerable damage to crop plants.
(Yoon et al., 2020)

SDN1
CRISPR/Cas

Seoul National University
National Institute of Horticultural and Herbal Science, South Korea

Fungal and bacterial resistance: increased resistance towards the bacterial pathogen Pseudomonas syringae pv. maculicola (Psm) and fungal pathogen Alternaria brassicicola.
(Yung Cha et al., 2023)

SDN1
CRISPR/Cas

Gyeongsang National University, South Korea

Resistance to parasitic weed: Phelipanche aegyptiaca. The obligate root parasitic plant causes great damages to important crops and represents one of the most destructive and greatest challenges for the agricultural economy.
(Bari et al., 2021)

SDN1
CRISPR/Cas

Central University of Punjab, India
Newe Ya’ar Research Center
Agricultural Research Organization (ARO), Israel

Fungal resistance: increased resistance to Erysiphe necator, causing powdery mildew in grape cultivar. The pathogen infects all green tissues and berries, leading to dramatic losses in yield and berry quality.
(Malnoy et al., 2016)

SDN1
CRISPR/Cas

Fondazione Edmund Mach, Italy
ToolGen Inc.
Institute for Basic Science
Seoul National University, South Korea

Fungal resistance: strong resistance against Fusarium oxysporum f. sp. lycopersici (Fol), which causes Fusarium Wilt Disease in tomato.
(Debbarma et al., 2023)

SDN1
CRISPR/Cas

CSIR-North East Institute of Science and Technology
Academy of Scientific and Innovative Research
Assam Agricultural University
Central Muga Eri Research and Training Institute
International Crop Research Institute for the Semi Arid Tropics, India

Viral and fungal resistance: Tomato yellow leaf curl virus (TYLCV) and powdery mildew (Oidium neolycopersici), diseases which reduce tomato crop yields and cause substantial economic losses each year.
(Pramanik et al., 2021)

SDN1
CRISPR/Cas

Gyeongsang National University
Pusan National University
R&
D Center, Bunongseed Co., South Korea

Viral resistance: increased resistance to turnip mosaic virus (TuMV).
(Lee et al., 2023)

SDN1
CRISPR/Cas

Rural Development Administration
Advanced Institute for Science and Technology, South Korea
North Carolina State University, USA

Plant parasitic resitance: Broomrape resistant plants. Broomrape (Orobanche cumana Wallr) threatens the sunflower production in countries in Central and Eastern Europe as well as in Spain, Turkey, Israel, Iran, Kazakhstan, and China.
(Yildirim et al., 2023)

SDN1
CRISPR/Cas

Department of Molecular Bioloqy and Genetics Ondokuz Mayıs University
Sunflower Institute of Field and Vegetable Crops
Department of Biomedical Engineering Akdeniz University, Turkey

Viral resistance: resistance to rice tungro disease (RTD), the most important viral disease that limits rice production.
(Kumam et al., 2022)

SDN1
CRISPR/Cas

Tamil Nadu Agricultural University
International Centre for Genetic Engineering and Biotechnology
ICAR-Indian Institute of Rice Research, India

Bacterial resistance: Increased resistance to Erwinia amylovora, causing fire blight disease that threatens the apple and a wide range of ornamental and commercial Rosaceae host plants.
(Malnoy et al., 2016)

SDN1
CRISPR/Cas

Fondazione Edmund Mach, Italy
ToolGen Inc.
Institute for Basic Science
Seoul National University, South Korea

Bacterial resistance: enhanced resistance to Xanthomonas oryzae, causing bacterial blight, a devastating rice disease resulting in yield losses.
(Kim et al., 2019)

SDN1
CRISPR/Cas

Sejong University, South Korea

Viral resistance: Increased resistance against watermelon mosaic virus (WMV), papaya ringspot virus (PRSV), and zucchini yellow mosaic virus (ZYMV).
(Fidan et al., 2023)

SDN1
CRISPR/Cas

Akdeniz University
Research and Development Department AD ROSSEN Seeds, Turkey

Bacterial resistance: Resistance/moderately resistance against Bacterial leaf blight (BLB), caused by Xanthomonas oryzae pv oryzae (Xoo). BLB is a major constraint in rice production.
(Arulganesh et al., 2022)

SDN1
CRISPR/Cas

Tamil Nadu Agricultural University, India

Bacterial resistance: Plant moderately resistant against a strain of the gram-negative bacterium, Xanthomonas oryzae pv. oryzae (Xoo). Xoo severely impacts rice productivity by causing bacterial leaf blight disease.
(Bhagya Sree et al., 2023)

SDN1
CRISPR/Cas

Tamil Nadu Agricultural University, India

Fungal resistance: enhanced resistance against powdery mildew disease.
(Xu et al., 2023)

SDN1
CRISPR/Cas

Kyungpook National University
Rural Development Administration
Sunchon National University, South Korea
Lingnan Normal University, China

Herbicide resistance: pds (phytoene desaturase), ALS (acetolactate synthase), and EPSPS (5-Enolpyruvylshikimate-3-phosphate synthase)
(Yang et al., 2022)

SDN1
CRISPR/Cas

Chonnam National University, South Korea

Viral resistance: increased resistance against Tobacco Mosaic Virus (TMV).
(Jogam et al., 2023)

SDN1
CRISPR/Cas

Kakatiya University
Center of Innovative and Applied Bioprocessing (DBT-CIAB), India
University of Minnesota
East Carolina University, USA

Fungal resistance: Resistance to pathogen Colletotrichum truncatum, causing anthracnose, a major disease accounting for significant pre- and post-harvest yield losses.
(Mishra et al., 2021)

SDN1
CRISPR/Cas

Centurion University of Technology and Management
Siksha O Anusandhan University
Rama Devi Women'
s University, India

Bacterial resistance: Enhanced resistance against hemibiotrophic pathogens M. oryzae and Xanthomonas oryzae pv. oryzae (but increased susceptibility to Cochliobolus miyabeanus)
(Kim et al., 2022)

SDN1
CRISPR/Cas

Seoul National University
Kyung Hee University, South Korea
Pennsylvania State University, USA

Traits related to industrial utilization

Haploid induction to accelerate breeding in crop plants.
( Rangari et al., 2023 )

SDN1
CRISPR/Cas

Punjab Agricultural University, India

Smaller petunia plants with high flower abundance.
( Abdulla et al., 2024 )

SDN1
CRISPR/Cas

Ondokuz Mayis University, Turkey
Agricultural Research Center (ARC), Egypt

Bio-fuel production: Reduced lignin content, improves cell wall composition for production of bio-ethanol.
(Jung et al., 2016)

SDN1
TALENs

Korea University, South Korea
University of Florida, USA

Male sterility: mutants did not produce pollen and induced a parthenocarpic fruit set.
(Gökdemir et al., 2022)

SDN1
CRISPR/Cas

Ondokuz Mayıs University
Burdur Mehmet Akif Ersoy University, Turkey

Delayed flowering time.
( Hong et al., 2021 )

SDN1
CRISPR/Cas

National Institute of Agricultural Sciences, South Korea

Conversion of hulled into naked barley.
( Gasparis et al., 2018 )

SDN1
CRISPR/Cas

National Research Institute
Warsaw University of Life Sciences (SGGW), Poland

Genetic variability. The genetically reprogrammed rice plants can act as donor lines to stabilize important agronomic traits or can be a potential resource to create more segregating population.
( K et al., 2021 )

SDN1
CRISPR/Cas

University of Agricultural Sciences
Regional Centre for Biotechnology, India

Increased monounsaturated fatty acid contents (MUFAs). Due to their higher thermal-oxidative stability and viscosity relative to other common fatty acids, MUFAs are preferred for industrial uses, for example as biolubricants and biodiesel fuels.
( Lee et al., 2021 )

SDN1
CRISPR/Cas

National Institute of Agricultural Sciences
Korea Advanced Institute of Science and Technology
Chonnam National University
Plant Engineering Research Institute, South Korea

Early-flowering.
( Jeong et al., 2021 )

SDN1
CRISPR/Cas

Department of Biological Science
Seoul National University
Chungnam National University
Institute for Basic Science
Kangwon National University
Kyunghee University, South Korea

Induction of haploid plants and a reduced seed set for rice breeding.
( Yao et al., 2018 )

SDN2
CRISPR/Cas

ZhongGuanCun Life Science Park, China
Syngenta India Limited
Technology Centre
Medchal Mandal, India
Syngenta Crop Protection
LLC
Research Triangle Park, USA

Improve biofuel production by mediating lignin modification. Lignocellulosic biomasses are an abundant renewable source of carbon energy. Heterogenous properties of lignocellulosic biomass and intrinsic recalcitrance caused by cell wall lignification lower the biorefinery efficiency. Reduced lignin content is desired.
( Lee et al., 2021 )

SDN1
CRISPR/Cas

Korea Institute of Science and Technology (KIST)
University of Science and Technology (UST)
Daejeon, South Korea

Manipulation of the biosynthesis of bioactive compound alkaloids. Poppy produces many benzylisoquinoline alkaloids (BIAs) used in biomedicines.
( Alagoz et al., 2016 )

SDN1
CRISPR/Cas

Cankiri Karatekin University
Dokuz Eylul University, Turkey

Bioethanol production: Improved saccharification efficiency without compromising biomass yield.
(Kannan et al., 2017)

SDN1
TALENs

University of Florida
Novozymes North America Inc, USA
Korea Institute of Science and Technology (KIST), South Korea

Higher haploid induction rate. Haploid induction allows formation of doubled haploids, which can be used to rapidly fix genetic information.
( Jang et al., 2023 )

SDN1
CRISPR/Cas

Chonnam National University
Pusan National University
Kyung Hee University, South Korea

Generating male sterility lines (MLS). Using MLS in hybrid seed production reduces costs and ensures high purity of the varieties because it does not produce pollen and has exserted stigmas.
( Jung et al., 2020 )

SDN1
CRISPR/Cas

Hankyong National University
Hanyang University
Sunchon National University
Chungbuk National University
Tomato Research Center, South Korea

Generating male sterility lines (MLS) and enhanced tolerance against drought stress. Using MLS in hybrid seed production reduces costs and ensures high purity of the varieties because it does not produce pollen and has exserted stigmas.
( Secgin et al., 2022 )

SDN1
CRISPR/Cas

Ondokuz Mayıs University
Burdur Mehmet Akif Ersoy University
Ondokuz Mayıs University, Turkey
Agricultural Research Center (ARC), Egypt

Traits categories

Genome Editing Technique

Countries

Plant

Sdn Type

Traits related to biotic stress tolerance

Traits related to industrial utilization