genome search | EU-SAGE

Genome-editing techniques are promising tools in plant breeding. To facilitate a more comprehensive understanding of the use of genome editing, EU-SAGE developed an interactive, publicly accessible online database of genome-edited crop plants as described in peer-reviewed scientific publications.
The aim of the database is to inform interested stakeholder communities in a transparent manner about the latest evidence about the use of genome editing in crop plants. Different elements including the plant species, traits, techniques, and applications can be filtered in this database.
Regarding the methodology, a literature search in the bibliographic databases and web pages of governmental agencies was conducted using predefined queries in English. Identifying research articles in other languages was not possible due to language barriers. Patents were not screened.
Peer-reviewed articles were screened for relevance and were included in the database based on pre-defined criteria. The main criterium is that the research article should describe a research study of any crop plant in which a trait has been introduced that is relevant from an agricultural and/or food/feed perspective. The database does neither give information on the stage of development of the crop plant, nor on the existence of the intention to develop the described crop plants to be marketed.
This database will be regularly updated. Please contact us via the following webpage in case you would like to inform us about a new scientific study of crops developed for market-oriented agricultural production as a result of genome editing

Displaying 34 results

Traits related to biotic stress tolerance

Viral resistance: Increased resistance against watermelon mosaic virus (WMV), papaya ringspot virus (PRSV), and zucchini yellow mosaic virus (ZYMV).
(Fidan et al., 2023)

SDN1
CRISPR/Cas

Akdeniz University
Research and Development Department AD ROSSEN Seeds, Turkey

Bacterial resistance: Strong resistance to Xanthomonas oryzae, causing bacterial blight, a devastating rice disease resulting in yield losses.
(Wang et al., 2017)

SDN1
TALENs

National University of Singapore, Singapore

Bacterial resistance: enhanced disease resistance to Clavibacter michiganensis subsp. michiganensis infection.
(García-Murillo et al., 2023)

CRISPR/Cas

Center for Research and Advanced Studies of the National Polytechnic Institute, Mexico

Broad-spectrum disease resistance without yield loss.
( Sha et al., 2023 )

SDN1
CRISPR/Cas

Huazhong Agricultural University
Chengdu Normal University
Jiangxi Academy of Agricultural Sciences
Anhui Agricultural University
BGI-Shenzhen
Northwest A&
F University
Shandong Academy of Agricultural Sciences, China
Université de Bordeaux, France
University of California
The Joint BioEnergy Institute, USA
University of Adelaide, Australia

Plant parasitic resitance: Broomrape resistant plants. Broomrape (Orobanche cumana Wallr) threatens the sunflower production in countries in Central and Eastern Europe as well as in Spain, Turkey, Israel, Iran, Kazakhstan, and China.
(Yildirim et al., 2023)

SDN1
CRISPR/Cas

Department of Molecular Bioloqy and Genetics Ondokuz Mayıs University
Sunflower Institute of Field and Vegetable Crops
Department of Biomedical Engineering Akdeniz University, Turkey

Traits related to abiotic stress tolerance

Higher tolerance to salt and osmotic stress through reduced stomatal conductance coupled with increased leaf relative water content and Abscisic acid (ABA) content under normal and stressful conditions.
( Bouzroud et al., 2020 )

SDN1
CRISPR/Cas

Université Mohammed V de Rabat, Morocco
Université de Toulouse, France
Universidade Federal de Viçosa, Brazil

Drought and salt tolerance.
( Curtin et al., 2018 )

SDN1
CRISPR/Cas

University of Minnesota, USA
The University of Newcastle, Australia

Enhanced drought tolerance.
( Wang et al., 2023 )

SDN1
CRISPR/Cas

Chinese Academy of Agricultural Sciences, China
International Maize and Wheat Improvement Center, Mexico

Traits related to improved food/feed quality

Low glutelin content in the rice germplasm: patients with chronic kidney disease (CKD) and phenylketonuria (PKU) need to eat rice with low glutelin content.
(Chen et al., 2022)

SDN1
CRISPR/Cas

Nanjing Branch of Chinese National Center for Rice Improvement
Yangzhou University
Henan Agricultural University
Jiangsu Academy of Agricultural Sciences, China
CSIRO Agriculture and Food, Australia

Reduced amount of saturated fatty acids (FA) in soybean seeds for nutrititional improvement. FA are linked to cardiovascular diseases.
( Ma et al., 2021 )

SDN1
CRISPR/Cas

Zhejiang University, China
La Trobe University, Australia

Enhanced fatty acid composition: high oleic acid content. High oleic sunflower is desirable because of health benefits and industrial use.
(Uslu et al., 2022)

SDN1
CRISPR/Cas

Marmara University
Gebze Technical University, Turkey

Reduced browning and acrylamide. Acrylamide is a contaminant which forms during the baking, toasting and high-temperature processing of foods and is regarded as a potential carcinogen and neurotoxin.
( Nguyen Phuoc Ly et al., 2023 )

SDN1
CRISPR/Cas

Murdoch University, Australia

Reduced flavonoids and improved fatty acid composition with higher linoleic acid and linolenic acid, valuable for rapeseed germplasm and breeding. The genetic improvement has great significance in the economic value of rapeseeds.
( Xie et al., 2020 )

SDN1
CRISPR/Cas

Yangzhou University
The Ministry of Education of China, China
University of Western Australia, Australia

Reduced levels of very long chain saturated fatty acids in kernels, which are associated with revalance of atherosclerosis and cardiovascular disease.
( Huai et al., 2024 )

SDN1
CRISPR/Cas

Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, China
International Crops Research Institute of the Semi-Arid Tropics (ICRISAT), India
Murdoch University, Australia

Changing grain composition: decrease in the prolamines, an increase in the glutenins, increased starch content, amylose content, and β-glucan content. The protein matrix surrounding the starch granules was increased.
(Yang et al., 2020)

SDN1
CRISPR/Cas

Sichuan Agricultural University, China
Norwich Research Park, UK
CSIRO Agriculture and Food, Australia

Highly specific detection of Ochratoxin A (OTA) in cereal samples. OTA is classified as a Class 2B carcinogens. The method can be flexibly customized to detect a wide range of small molecular targets and holds great promise as a versatile sensing kit with applications in various fields requiring sensitive and specific detection of diverse analytes.
( Chen et al., 2023 )

SDN1
CRISPR/Cas

Ningbo University
Hainan University
Ningbo Clinical Pathology Diagnosis Center, China
University of New South Wales, Australia

Specific differences in grain morphology, composition and (1,3;1,4)-β-glucan content. Barley rich in (1,3;1,4)-β-glucan, a source of fermentable dietary fibre, is useful to protect against various human health conditions. However, low grain (1,3;1,4)-β-glucan content is preferred for brewing and distilling.
( Garcia-Gimenez et al., 2020 )

SDN1
CRISPR/Cas

The James Hutton Institute
University of Dundee, UK
University of Adelaide
La Trobe University, Australia

Fine-tuning the amylose content, one of the major contributors to the eating and cooking quality.
( Xu et al., 2021 )

Jiangsu Academy of Agricultural Sciences/Nanjing Branch of Chinese National Center for Rice Improvement
Yangzhou University
Chinese Academy of Sciences, China
CSIRO Agriculture and Food, Australia

Traits related to increased plant yield and growth

Semi-dwarf phenotype to improve lodging resistance and increased seed dormancy. Increased seed dormancy can be beneficial for use in the malting industry.
( Cheng et al., 2023 )

SDN1
CRISPR/Cas

University of Tasmania
Murdoch University
Department of Primary Industries and Regional Development, Australia
Chinese Academy of Agricultural Sciences, China

Altering leaf inclination angle which has the potential to elevate yield in high-density plantings.
( Brant et al., 2022 )

SDN1
CRISPR/Cas

University of Florida
DOE Center for Advanced Bioenergy and Bioproducts Innovation, USA
Kastamonu University, Turkey

Increase in plant height, tiller number, grain protein content and yield. 1.5- to 2.8-fold increase in total chlorophyll content in the flag leaf at the grain filling stage. Delayed senescence by 10–14 days. High nitrogen content in shoots under low nitrogen conditions.
( Karunarathne et al., 2022 )

SDN1
CRISPR/Cas

Murdoch University
Department of Primary Industries and Regional Development, Australia

Positive regulation for grain dormancy. Lack of grain dormancy in cereal crops causes losses in yield and quality because of preharvest sprouting.
( Lawrenson et al., 2015 )

SDN1
CRISPR/Cas

Norwich Research Park, UK
Murdoch University, Australia

Traits related to industrial utilization

Generation of male-sterile hexaploid wheat lines for use in hybrid seed production. The development and adoption of hybrid seed technology have led to dramatic increases in agricultural productivity.
( Okada et al., 2019 )

SDN1
CRISPR/Cas

The University of Adelaide, Australia
Huaiyin Normal University, China

Male sterility: mutants did not produce pollen and induced a parthenocarpic fruit set.
(Gökdemir et al., 2022)

SDN1
CRISPR/Cas

Ondokuz Mayıs University
Burdur Mehmet Akif Ersoy University, Turkey

Generation of a new thermo-sensitive genic male sterile rice line for hybrid breeding of indica rice.
( Barman et al., 2019 )

SDN1
CRISPR/Cas

China National Rice Research Institute, China
Bangladesh Rice Research Institute, Bangladesh

Pollen Self-Elimination, which prevents pollen transgene dispersal.
( Wang et al., 2023 )

SDN1
CRISPR/Cas

Chinese Academy of Agricultural Sciences (CAAS)
Northwest A&
F University
Hainan Yazhou Bay Seed Lab
Henan Jinyuan Seed Industry Co., China
International Maize and Wheat Improvement Center (CIMMYT), Mexico

Early heading: in regions with short growing seasons, early maturing varieties to escape frost damage are required.
(Sohail et al., 2022)

SDN1
CRISPR/Cas

China National Rice Research Institute
Northern Center of China National Rice Research Institute
Zhejiang A&
F University, China
Mir Chakar Khan Rind University
Agriculture Research System Khyber, Pakistan
Ministry of Agriculture, Bangladesh
Agriculture Research Center, Egypt

Manipulation of the biosynthesis of bioactive compound alkaloids. Poppy produces many benzylisoquinoline alkaloids (BIAs) used in biomedicines.
( Alagoz et al., 2016 )

SDN1
CRISPR/Cas

Cankiri Karatekin University
Dokuz Eylul University, Turkey

Smaller petunia plants with high flower abundance.
( Abdulla et al., 2024 )

SDN1
CRISPR/Cas

Ondokuz Mayis University, Turkey
Agricultural Research Center (ARC), Egypt

Generating male sterility lines (MLS) and enhanced tolerance against drought stress. Using MLS in hybrid seed production reduces costs and ensures high purity of the varieties because it does not produce pollen and has exserted stigmas.
( Secgin et al., 2022 )

SDN1
CRISPR/Cas

Ondokuz Mayıs University
Burdur Mehmet Akif Ersoy University
Ondokuz Mayıs University, Turkey
Agricultural Research Center (ARC), Egypt

Traits related to herbicide tolerance

Imazethapyr, imazapic
( Wang et al., 2020 )

SDN1
CRISPR/Cas

Jiangsu Academy of Agricultural Sciences/Nanjing Branch of Chinese National Center for Rice Improvement
Yangzhou University
Jiangsu University, China
CSIRO Agriculture and Food, Australia

Herbicide tolerance (ALS-targeting)
( Wang et al., 2020 )

SDN1
CRISPR/Cas

Jiangsu Academy of Agricultural Sciences/Nanjing Branch of Chinese National Center for Rice Improvement
Yangzhou University
Jiangsu Academy of Agricultural Sciences
Jiangsu University, China
CSIRO Agriculture and Food, Australia

Herbicide glyphosate tolerance.
( Arndell et al., 2019 )

SDN1
CRISPR/Cas

CSIRO
New South Wales Department of Primary Industries
The University of Adelaide, Australia

Traits related to product color/flavour

Albinism and dwarfing.
( Naim et al., 2018 )

SDN1
CRISPR/Cas

Queensland University of Technology, Australia

Traits categories

Genome Editing Technique

Countries

Plant

Sdn Type

Traits related to biotic stress tolerance

Traits related to abiotic stress tolerance

Traits related to improved food/feed quality

Traits related to increased plant yield and growth

Traits related to industrial utilization

Traits related to herbicide tolerance

Traits related to product color/flavour